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    The Lancet. Global health. pii: S2214-109X(19)30264-5. doi: 10.1016/S2214-109X(19)30264-5
    Global patterns in monthly activity of influenza virus, respiratory syncytial virus, parainfluenza virus, and metapneumovirus: a systematic analysis.
    Li Y1,  Reeves RM2,  Wang X3,  Bassat Q4,  Brooks WA5,  Cohen C6,  Moore DP7,  Nunes M8,  Rath B9,  Campbell H10,  Nair H11
    Collaborators
    Acacio S Alonso WJ Antonio M Ayora Talavera G Badarch D Baillie VL Barrera-Badillo G Bigogo G Broor S Bruden D Buchy P Byass P Chipeta J Clara W Dang DA de Freitas Lázaro Emediato CC de Jong M Díaz-Quiñonez JA Do LAH Fasce RA Feng L Ferson MJ Gentile A Gessner BD Goswami D Goyet S Grijalva CG Halasa N Hellferscee O Hessong D Homaira N Jara J Kahn K Khuri-Bulos N Kotloff KL Lanata CF Lopez O Lopez Bolaños MR Lucero MG Lucion F Lupisan SP Madhi SA Mekgoe O Moraleda C Moyes J Mulholland K Munywoki PK Naby F Nguyen TH Nicol MP Nokes DJ Noyola DE Onozuka D Palani N Poovorawan Y Rahman M Ramaekers K Romero C Schlaudecker EP Schweiger B Seidenberg P Simoes EAF Singleton R Sistla S Sturm-Ramirez K Suntronwong N Sutanto A Tapia MD Thamthitiwat S Thongpan I Tillekeratne G Tinoco YO Treurnicht FK Turner C Turner P van Doorn R Van Ranst M Visseaux B Waicharoen S Wang J Yoshida LM Zar HJ
    Author information
    1Centre for Global Health Research, University of Edinburgh, Edinburgh, UK.
    2Centre for Global Health Research, University of Edinburgh, Edinburgh, UK.
    3Centre for Global Health Research, University of Edinburgh, Edinburgh, UK.
    4Centro de Investigação em Saúde de Manhiça, Maputo, Mozambique; ISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain; Institució Catalana de Recerca i Estudis Avançats, Barcelona, Spain.
    5Department of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
    6Centre for Respiratory Disease and Meningitis, National Institute for Communicable Disease, Johannesburg, South Africa; School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
    7Department of Paediatrics and Child Health, Chris Hani Baragwanath Academic Hospital and Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa; Medical Research Council, Respiratory and Meningeal Pathogens Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa; Department of Science and Technology-National Research Foundation, Vaccine Preventable Diseases, University of the Witwatersrand, Johannesburg, South Africa.
    8Medical Research Council, Respiratory and Meningeal Pathogens Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa; Department of Science and Technology-National Research Foundation, Vaccine Preventable Diseases, University of the Witwatersrand, Johannesburg, South Africa.
    9Vienna Vaccine Safety Initiative, Berlin, Germany; School of Medicine, University of Nottingham, Nottingham, UK.
    10Centre for Global Health Research, University of Edinburgh, Edinburgh, UK.
    11Centre for Global Health Research, University of Edinburgh, Edinburgh, UK. Electronic address: harish.nair@ed.ac.uk.
    Abstract

    BACKGROUND: Influenza virus, respiratory syncytial virus, parainfluenza virus, and metapneumovirus are the most common viruses associated with acute lower respiratory infections in young children (<5 years) and older people (≥65 years). A global report of the monthly activity of these viruses is needed to inform public health strategies and programmes for their control.

    METHODS: In this systematic analysis, we compiled data from a systematic literature review of studies published between Jan 1, 2000, and Dec 31, 2017; online datasets; and unpublished research data. Studies were eligible for inclusion if they reported laboratory-confirmed incidence data of human infection of influenza virus, respiratory syncytial virus, parainfluenza virus, or metapneumovirus, or a combination of these, for at least 12 consecutive months (or 52 weeks equivalent); stable testing practice throughout all years reported; virus results among residents in well-defined geographical locations; and aggregated virus results at least on a monthly basis. Data were extracted through a three-stage process, from which we calculated monthly annual average percentage (AAP) as the relative strength of virus activity. We defined duration of epidemics as the minimum number of months to account for 75% of annual positive samples, with each component month defined as an epidemic month. Furthermore, we modelled monthly AAP of influenza virus and respiratory syncytial virus using site-specific temperature and relative humidity for the prediction of local average epidemic months. We also predicted global epidemic months of influenza virus and respiratory syncytial virus on a 5° by 5° grid. The systematic review in this study is registered with PROSPERO, number CRD42018091628.

    FINDINGS: We initally identified 37 335 eligible studies. Of 21 065 studies remaining after exclusion of duplicates, 1081 full-text articles were assessed for eligibility, of which 185 were identified as eligible. We included 246 sites for influenza virus, 183 sites for respiratory syncytial virus, 83 sites for parainfluenza virus, and 65 sites for metapneumovirus. Influenza virus had clear seasonal epidemics in winter months in most temperate sites but timing of epidemics was more variable and less seasonal with decreasing distance from the equator. Unlike influenza virus, respiratory syncytial virus had clear seasonal epidemics in both temperate and tropical regions, starting in late summer months in the tropics of each hemisphere, reaching most temperate sites in winter months. In most temperate sites, influenza virus epidemics occurred later than respiratory syncytial virus (by 0·3 months [95% CI -0·3 to 0·9]) while no clear temporal order was observed in the tropics. Parainfluenza virus epidemics were found mostly in spring and early summer months in each hemisphere. Metapneumovirus epidemics occurred in late winter and spring in most temperate sites but the timing of epidemics was more diverse in the tropics. Influenza virus epidemics had shorter duration (3·8 months [3·6 to 4·0]) in temperate sites and longer duration (5·2 months [4·9 to 5·5]) in the tropics. Duration of epidemics was similar across all sites for respiratory syncytial virus (4·6 months [4·3 to 4·8]), as it was for metapneumovirus (4·8 months [4·4 to 5·1]). By comparison, parainfluenza virus had longer duration of epidemics (6·3 months [6·0 to 6·7]). Our model had good predictability in the average epidemic months of influenza virus in temperate regions and respiratory syncytial virus in both temperate and tropical regions. Through leave-one-out cross validation, the overall prediction error in the onset of epidemics was within 1 month (influenza virus -0·2 months [-0·6 to 0·1]; respiratory syncytial virus 0·1 months [-0·2 to 0·4]).

    INTERPRETATION: This study is the first to provide global representations of month-by-month activity of influenza virus, respiratory syncytial virus, parainfluenza virus, and metapneumovirus. Our model is helpful in predicting the local onset month of influenza virus and respiratory syncytial virus epidemics. The seasonality information has important implications for health services planning, the timing of respiratory syncytial virus passive prophylaxis, and the strategy of influenza virus and future respiratory syncytial virus vaccination.

    FUNDING: European Union Innovative Medicines Initiative Respiratory Syncytial Virus Consortium in Europe (RESCEU).


    Copyright © 2019 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.

    Publikations ID: 31303294
    Quelle: öffnen
     
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