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    Proceedings of the National Academy of Sciences of the United States of America. 2015 Oct 19. pii: 1515937112. doi: 10.1073/pnas.1515937112. pmc: PMC4653166
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies.
    Patalano S1,  Vlasova A2,  Wyatt C3,  Ewels P4,  Camara F5,  Ferreira PG6,  Asher CL7,  Jurkowski TP8,  Segonds-Pichon A9,  Bachman M10,  González-Navarrete I11,  Minoche AE12,  Krueger F13,  Lowy E14,  Marcet-Houben M15,  Rodriguez-Ales JL16,  Nascimento FS17,  Balasubramanian S18,  Gabaldon T19,  Tarver JE20,  Andrews S21,  Himmelbauer H22,  Hughes WO23,  Guigó R24,  Reik W25,  Sumner S26
    Author information
    1The Babraham Institute, Cambridge CB22 3AT, United Kingdom; solenn.patalano@babraham.ac.uk wolf.reik@babraham.ac.uk seirian.sumner@bristol.ac.uk.
    2Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    3Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain; School of Biological Sciences, University of Bristol, Bristol BS8 1TQ, United Kingdom;
    4The Babraham Institute, Cambridge CB22 3AT, United Kingdom; Department of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Stockholm 106 91, Sweden;
    5Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    6Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Instituto de Investigação e Inovação em Saúde, Universidade do Porto, 4200-135 Porto, Portugal; Institute of Molecular Pathology and Immunology of the University of Porto (IPATIMUP), Institute of Molecular Pathology and Immunology, University of Porto, 4200-135 Porto, Portugal;
    7Institute of Zoology, Zoological Society of London, London NW1 4RY, United Kingdom; Institute of Integrative and Comparative Biology, School of Biology, University of Leeds, Leeds LS2 9JT, United Kingdom;
    8Institute of Biochemistry, University of Stuttgart, 70569 Stuttgart, Germany;
    9The Babraham Institute, Cambridge CB22 3AT, United Kingdom;
    10Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 ORE, United Kingdom;
    11Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    12Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain; Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany;
    13The Babraham Institute, Cambridge CB22 3AT, United Kingdom;
    14Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    15Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    16Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    17Departamento de Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto (FFCLRP)-Universidade de São Paulo, 14040-901, Ribeirão Preto-SP, Brazil;
    18Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 ORE, United Kingdom; School of Clinical Medicine, University of Cambridge, CB2 0SP, Cambridge, United Kingdom;
    19Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain; Institució Catalana de Recerca i Estudis Avançats, 08010 Barcelona, Spain;
    20School of Earth Sciences, University of Bristol, BS8 1TQ, United Kingdom;
    21The Babraham Institute, Cambridge CB22 3AT, United Kingdom;
    22Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain; Department of Biotechnology, Universität für Bodenkultur, 1190 Vienna, Austria;
    23Institute of Integrative and Comparative Biology, School of Biology, University of Leeds, Leeds LS2 9JT, United Kingdom; School of Life Sciences, University of Sussex, Brighton BN1 9QG, United Kingdom;
    24Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain;
    25The Babraham Institute, Cambridge CB22 3AT, United Kingdom; Centre for Trophoblast Research, University of Cambridge, Cambridge CB2 3EG, United Kingdom; Wellcome Trust Sanger Institute, Hinxton CB10 1SA, United Kingdom solenn.patalano@babraham.ac.uk wolf.reik@babraham.ac.uk seirian.sumner@bristol.ac.uk.
    26School of Biological Sciences, University of Bristol, Bristol BS8 1TQ, United Kingdom; Institute of Zoology, Zoological Society of London, London NW1 4RY, United Kingdom; solenn.patalano@babraham.ac.uk wolf.reik@babraham.ac.uk seirian.sumner@bristol.ac.uk.
    Abstract

    Phenotypic plasticity is important in adaptation and shapes the evolution of organisms. However, we understand little about what aspects of the genome are important in facilitating plasticity. Eusocial insect societies produce plastic phenotypes from the same genome, as reproductives (queens) and nonreproductives (workers). The greatest plasticity is found in the simple eusocial insect societies in which individuals retain the ability to switch between reproductive and nonreproductive phenotypes as adults. We lack comprehensive data on the molecular basis of plastic phenotypes. Here, we sequenced genomes, microRNAs (miRNAs), and multiple transcriptomes and methylomes from individual brains in a wasp (Polistes canadensis) and an ant (Dinoponera quadriceps) that live in simple eusocial societies. In both species, we found few differences between phenotypes at the transcriptional level, with little functional specialization, and no evidence that phenotype-specific gene expression is driven by DNA methylation or miRNAs. Instead, phenotypic differentiation was defined more subtly by nonrandom transcriptional network organization, with roles in these networks for both conserved and taxon-restricted genes. The general lack of highly methylated regions or methylome patterning in both species may be an important mechanism for achieving plasticity among phenotypes during adulthood. These findings define previously unidentified hypotheses on the genomic processes that facilitate plasticity and suggest that the molecular hallmarks of social behavior are likely to differ with the level of social complexity.


    KEYWORDS: DNA methylation, genome sequencing, phenotypic plasticity, social evolution, transcriptomes

    Publikations ID: 26483466
    Quelle: öffnen
     
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